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  5. Cba_g15219

Cba_g15219 (TIF3H1)


Aliases : TIF3H1

Description : component *(eIF3h) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0004382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g15219
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Als_g00765 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Aop_g02099 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Ceric.21G002900.1 TIF3H1, Ceric.21G002900 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Cre16.g676314 TIF3H1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
GSVIVT01031659001 TIF3H1 Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
Gb_04869 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g30780.1 TIF3H1, LOC_Os04g30780 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
MA_32338g0010 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Mp3g20490.1 TIF3H1 component eIF3h of eIF3 mRNA-to-PIC binding complex 0.05 OrthoFinder output from all 47 species
Ore_g09311 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Pnu_g00648 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Smo153526 TIF3H1 Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Spa_g10694 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Spa_g14028 TIF3H1 component *(eIF3h) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008233 peptidase activity IEA Interproscan
MF GO:0008237 metallopeptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR045810 eIF3h_C 149 342
IPR000555 JAMM/MPN+_dom 27 118
No external refs found!