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  5. Cba_g14980

Cba_g14980 (CYP59, ATCYP59)


Aliases : CYP59, ATCYP59

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0004464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14980

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0108.g045234 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: CDS=162-2006 0.03 OrthoFinder output from all 47 species
Ceric.06G060600.1 CYP59, ATCYP59,... EC_5.2 cis-trans-isomerase & original description:... 0.01 OrthoFinder output from all 47 species
LOC_Os06g45900.1 CYP59, ATCYP59,... protein folding catalyst 0.03 OrthoFinder output from all 47 species
LOC_Os06g45910.1 CYP59, ATCYP59,... protein folding catalyst 0.02 OrthoFinder output from all 47 species
Lfl_g08219 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17184 CYP59, ATCYP59 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
CC GO:0000502 proteasome complex IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 3 160
IPR000504 RRM_dom 244 314
IPR001878 Znf_CCHC 352 367
No external refs found!