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  5. Cba_g14904

Cba_g14904 (ATCAP-C, ATSMC4, SMC3, ATSMC3)


Aliases : ATCAP-C, ATSMC4, SMC3, ATSMC3

Description : component *(CAP-C/SMC4) of condensin I/II complex & original description: none


Gene families : OG0004748 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004748_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14904

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00079920 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Adi_g019665 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Ala_g23510 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.05 OrthoFinder output from all 47 species
Als_g16126 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
Aop_g09601 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04548.t1 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043172 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
Dac_g01058 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g14679 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011408001 ATCAP-C, ATSMC4,... Cell cycle.mitosis and meiosis.chromatin... 0.02 OrthoFinder output from all 47 species
Len_g03914 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
Msp_g32088 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Nbi_g09270 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Ppi_g09236 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.06 OrthoFinder output from all 47 species
Sam_g07968 No alias component *(CAP-C/SMC4) of condensin I/II complex &... 0.03 OrthoFinder output from all 47 species
Spa_g10497 ATCAP-C, ATSMC4,... component *(CAP-C/SMC4) of condensin I/II complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR010935 SMC_hinge 550 666
IPR003395 RecF/RecN/SMC_N 20 1222
No external refs found!