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  5. Cba_g14276

Cba_g14276 (SPS3F, ATSPS3F)


Aliases : SPS3F, ATSPS3F

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0000773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000773_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14276

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00145220 SPS3F, ATSPS3F Carbohydrate metabolism.sucrose... 0.03 OrthoFinder output from all 47 species
Cba_g04728 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24308 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g20660.1 SPS1F, ATSPS1F,... sucrose-phosphate synthase 0.02 OrthoFinder output from all 47 species
Pp3c9_24289V3.1 Pp3c9_24289 Sucrose-phosphate synthase family protein 0.02 OrthoFinder output from all 47 species
Solyc08g042000.3.1 SPS1F, ATSPS1F,... sucrose-phosphate synthase 0.02 OrthoFinder output from all 47 species
Tin_g03525 SPS3F, ATSPS3F EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003779 actin binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR000368 Sucrose_synth 164 427
IPR006380 SPP-like_dom 826 1030
IPR001296 Glyco_trans_1 476 648
No external refs found!