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Cba_g14262


Description : E3 ubiquitin ligase *(CHY) & original description: none


Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cba_g14262

Target Alias Description ECC score Gene Family Method Actions
Cre17.g718300 No alias E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ppi_g28745 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004657_P008 Zm00001e004657 E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008913 Znf_CHY 48 128
IPR039512 RCHY1_zinc-ribbon 230 288
IPR001841 Znf_RING 182 225
No external refs found!