Cba_g14193 (LUG, RON2)


Aliases : LUG, RON2

Description : component *(LUG/LUH) of transcriptional co-repressor complex & original description: none


Gene families : OG0000790 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000790_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g14193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00252820 LUG, RON2,... RNA biosynthesis.transcriptional repression.LUG... 0.02 OrthoFinder output from all 47 species
Adi_g067892 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.04 OrthoFinder output from all 47 species
Cba_g55063 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
LOC_Os02g56880.1 LUH, LOC_Os02g56880 transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species
Len_g22762 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
MA_704500g0010 LUH transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species
MA_950191g0010 LUH transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species
Mp2g12170.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g01631 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Msp_g47917 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018269 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.02 OrthoFinder output from all 47 species
Sam_g26900 No alias component *(LUG/LUH) of transcriptional co-repressor... 0.03 OrthoFinder output from all 47 species
Solyc06g065640.3.1 LUG, RON2, Solyc06g065640 transcriptional co-repressor (LUG) 0.03 OrthoFinder output from all 47 species
Solyc06g083460.4.1 LUH, Solyc06g083460 transcriptional co-repressor (LUG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 283 318
IPR001680 WD40_repeat 197 233
IPR001680 WD40_repeat 239 275
IPR001680 WD40_repeat 365 398
IPR001680 WD40_repeat 452 485
No external refs found!