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  5. Lfl_g32054

Lfl_g32054 (ATMYC2, MYC2,...)


Aliases : ATMYC2, MYC2, RD22BP1, JIN1, ZBF1, JAI1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g32054

Target Alias Description ECC score Gene Family Method Actions
Aob_g04436 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025419 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2238 0.03 OrthoFinder output from all 47 species
Cba_g75805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G078500.1 Ceric.23G078500 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g28412 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g11225 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_1670089g0010 ATMYC2, MYC2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06465 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14442 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20048 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08808 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19780 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55797 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03440 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12721 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003740_P001 Zm00001e003740 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e026126_P001 Zm00001e026126 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 585 630
IPR025610 MYC/MYB_N 86 287
No external refs found!