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  5. Cba_g13770

Cba_g13770


Description : not classified & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13770

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00176570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G07580 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001518 ATERF12, ERF12 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g006781 PUCHI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013362 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g022277 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041740 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g053440 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g25693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g33703 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04135 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Als_g07015 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Als_g27891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48547 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59906 ERF110 subgroup ERF-X transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04033 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aob_g13161 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07634.t1 Aspi01Gene07634 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21107.t1 ORA47, Aspi01Gene21107 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41136.t1 CRF3, Aspi01Gene41136 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58616.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0154.g053565 RAP2.6 subgroup ERF-X transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0233.g059392 DEAR3 not classified & original description: CDS=1-1401 0.02 OrthoFinder output from all 47 species
Ceric.10G005300.1 RAP2.12, Ceric.10G005300 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Dac_g02651 DEAR2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g09467 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g14308 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33437 TINY2 subgroup ERF-III transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dac_g40206 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02635 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g07535 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g19945 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23206 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g25390 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
GSVIVT01004798001 ERF-1, ATERF-1 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01016684001 RAP2.12 Ethylene-responsive transcription factor RAP2-12... 0.04 OrthoFinder output from all 47 species
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01019860001 ddf2 External stimuli response.temperature.ICE-CBF cold... 0.02 OrthoFinder output from all 47 species
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01028050001 HRE2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01028315001 ERF1, ATERF1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01030515001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01035502001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_06962 ERF72, EBP, ATEBP, RAP2.3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_20532 DEAR3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24891 RAP2.12 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_26438 HRE1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09717.1 LOC_Os06g09717 Ethylene-responsive transcription factor ERF018... 0.03 OrthoFinder output from all 47 species
LOC_Os06g11940.1 LOC_Os06g11940 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
LOC_Os06g36000.1 TINY2, LOC_Os06g36000 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31580.1 RAP2.4, LOC_Os08g31580 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41130.1 LOC_Os10g41130 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g16167 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g26716 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_225124g0010 ERF-1, ATERF-1 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp7g09350.1 ERF-1, ATERF-1 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Nbi_g00480 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04123 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g09626 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20838 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ore_g40972 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g17077 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Pir_g24856 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42920 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26066 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ppi_g63080 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g63803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo104978 TINY2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Solyc01g008880.3.1 CRF5, Solyc01g008880 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc01g009440.3.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc01g090560.4.1 Solyc01g090560 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc03g005520.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc04g054910.4.1 Solyc04g054910 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Solyc04g080910.1.1 Solyc04g080910 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc05g051180.3.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g066660.1.1 TINY2, Solyc08g066660 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089920.1.1 Solyc09g089920 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g056590.2.1 ERF110, Solyc12g056590 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Spa_g04184 DEAR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17336 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000608_P002 Rap2.6L, Zm00001e000608 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
Zm00001e006753_P003 RAP2.9, DEAR5,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e013096_P001 ATERF3, ERF3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e015429_P001 Zm00001e015429 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Zm00001e017516_P001 HRE2, Zm00001e017516 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023686_P001 Zm00001e023686 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026192_P001 HRE2, Zm00001e026192 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e032033_P001 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034741_P001 RAP2.11, Zm00001e034741 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 94 143
No external refs found!