Cba_g13522


Description : not classified & original description: none


Gene families : OG0005577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005577_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13522

Target Alias Description ECC score Gene Family Method Actions
AT1G73110 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Aev_g06596 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g06168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72562.t1 Aspi01Gene72562 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G032500.1 Ceric.08G032500 not classified & original description: pacid=50638582... 0.07 OrthoFinder output from all 47 species
Dac_g14854 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g24022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016062001 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder output from all 47 species
LOC_Os04g56320.1 LOC_Os04g56320 Ribulose bisphosphate carboxylase/oxygenase activase 2,... 0.02 OrthoFinder output from all 47 species
Len_g50097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 OrthoFinder output from all 47 species
MA_379291g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g04090.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.05 OrthoFinder output from all 47 species
Msp_g02450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020487 No alias not classified & original description: CDS=305-1777 0.05 OrthoFinder output from all 47 species
Sam_g29423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49192 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo82367 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 OrthoFinder output from all 47 species
Solyc03g117850.4.1 Solyc03g117850 Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 OrthoFinder output from all 47 species
Spa_g53767 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 220 362
No external refs found!