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  5. Cba_g13226

Cba_g13226 (ATMC1, LOL3, MCP1B,...)


Aliases : ATMC1, LOL3, MCP1B, MC1, ATMCPB1

Description : programmed cell death metacaspase-like regulator *(MCP1) & original description: none


Gene families : OG0001440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001440_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g13226

Target Alias Description ECC score Gene Family Method Actions
Aob_g07196 ATMC1, LOL3,... programmed cell death metacaspase-like regulator *(MCP1)... 0.03 OrthoFinder output from all 47 species
MA_9247617g0010 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.01 OrthoFinder output from all 47 species
Solyc01g088710.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.02 OrthoFinder output from all 47 species
Solyc03g094160.3.1 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.03 OrthoFinder output from all 47 species
Zm00001e037833_P003 ATMC1, LOL3,... MCP1 programmed cell death metacaspase-like regulator 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR005735 Znf_LSD1 18 41
No external refs found!