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  5. Cba_g12761

Cba_g12761


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12761
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Als_g16446 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.31G017600.1 Ceric.31G017600 EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G017800.1 Ceric.31G017800 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01028104001 ATBXL2, BXL2 Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
Gb_26639 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Gb_32463 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Gb_34864 XYL4, ATBXL4 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os11g19160.1 LOC_Os11g19160 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
LOC_Os11g19210.1 LOC_Os11g19210 bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species
Len_g05441 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44150 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g072850.4.1 Solyc04g072850 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Zm00001e041753_P002 XYL4, ATBXL4,... bifunctional alpha-L-arabinofuranosidase and... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 453 683
IPR001764 Glyco_hydro_3_N 167 408
IPR026891 Fn3-like 747 816
No external refs found!