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  5. Cba_g12749

Cba_g12749 (BIM1)


Aliases : BIM1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0002413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002413_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12749

Target Alias Description ECC score Gene Family Method Actions
Aob_g03454 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05232 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0087.g042304 BIM1 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ore_g29624 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26053 BIM1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034451_P006 BIM2, Zm00001e034451 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004143 diacylglycerol kinase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 224 272
No external refs found!