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Cba_g12244


Description : subunit gamma *(CCT3) of CCT chaperonin folding complex & original description: none


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Cba_g12244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Aob_g10140 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Azfi_s0112.g045781 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025987 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Tin_g01973 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 31 524
No external refs found!