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  5. Cba_g12145

Cba_g12145


Description : not classified & original description: none


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g12145
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.06 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g18492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cre10.g446350 No alias PsbP domain-containing protein 3, chloroplastic... 0.01 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g08264 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp8g10040.1 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.03 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 80 239
No external refs found!