Cba_g11872


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11872

Target Alias Description ECC score Gene Family Method Actions
Adi_g015298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26234.t1 Aspi01Gene26234 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G052600.1 Ceric.08G052600 not classified & original description: pacid=50638471... 0.02 OrthoFinder output from all 47 species
Ceric.1Z097000.1 Ceric.1Z097000 not classified & original description: pacid=50640979... 0.02 OrthoFinder output from all 47 species
Dac_g07351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00839 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g30620.3 LOC_Os02g30620 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08633 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10923 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo122991 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g005300.3.1 Solyc08g005300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025632_P001 Zm00001e025632 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025633_P001 Zm00001e025633 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e036676_P001 Zm00001e036676 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e040755_P001 Zm00001e040755 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e041002_P001 Zm00001e041002 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 128
IPR024593 DUF3444 575 775
No external refs found!