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  5. Cba_g11723

Cba_g11723


Description : not classified & original description: none


Gene families : OG0000410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11723
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00065520 evm_27.TU.AmTr_v1... Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Adi_g007643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G046000.1 Ceric.21G046000 not classified & original description: pacid=50603624... 0.02 OrthoFinder output from all 47 species
LOC_Os03g20940.1 LOC_Os03g20940 Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os07g48460.1 LOC_Os07g48460 Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os07g48490.2 LOC_Os07g48490 Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Nbi_g24138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015570 No alias not classified & original description: CDS=1511-1843 0.03 OrthoFinder output from all 47 species
Zm00001e010991_P001 Zm00001e010991 Ricin B-like lectin R40C1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e035882_P001 Zm00001e035882 Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!