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  5. Cba_g11615

Cba_g11615


Description : microtubule assembly factor *(TCS1) & original description: none


Gene families : OG0000207 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11615
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00158230 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
AT1G19835 No alias Plant protein of unknown function (DUF869) 0.03 OrthoFinder output from all 47 species
AT3G05270 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
AT3G19370 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
AT4G36120 No alias Plant protein of unknown function (DUF869) 0.02 OrthoFinder output from all 47 species
Ala_g08039 No alias microtubule assembly factor *(TCS1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04613 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48635.t1 Aspi01Gene48635 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62960.t1 Aspi01Gene62960 microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18822 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022085001 No alias Vesicle trafficking.target membrane tethering.VETH... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06910.1 LOC_Os11g06910 Exocyst complex recruiting factor (VETH) 0.02 OrthoFinder output from all 47 species
Len_g21207 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14167 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01482 No alias microtubule assembly factor *(TCS1) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18883 No alias microtubule assembly factor *(TCS1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009503 No alias not classified & original description: CDS=366-3284 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021772 No alias microtubule assembly factor *(TCS1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g45561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo104884 No alias Filament-like plant protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g093160.3.1 Solyc02g093160 Filament-like plant protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g081260.3.1 Solyc04g081260 Filament-like plant protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g068070.2.1 Solyc12g068070 Exocyst complex recruiting factor (VETH) 0.02 OrthoFinder output from all 47 species
Spa_g10421 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g27921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR008587 FPP_plant 99 1028
No external refs found!