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  5. Cba_g11571

Cba_g11571


Description : nucleocytoplasmic transport karyopherin *(MOS14) & original description: none


Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11571

Target Alias Description ECC score Gene Family Method Actions
AT5G62600 No alias ARM repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g024083 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Aev_g24041 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04731.t1 Aspi01Gene04731 nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0030.g024383 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.02 OrthoFinder output from all 47 species
Dde_g00929 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.03 OrthoFinder output from all 47 species
MA_247862g0010 No alias TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species
Pp3c11_11570V3.1 Pp3c11_11570 ARM repeat superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g22253 No alias nucleocytoplasmic transport karyopherin *(MOS14) &... 0.04 OrthoFinder output from all 47 species
Smo100270 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Zm00001e004571_P001 Zm00001e004571 TNPO3 nucleocytoplasmic transport karyopherin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
MF GO:0031267 small GTPase binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0015850 organic hydroxy compound transport IEP HCCA
BP GO:0015918 sterol transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032365 intracellular lipid transport IEP HCCA
BP GO:0032366 intracellular sterol transport IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR001494 Importin-beta_N 26 90
IPR013598 Exportin-1/Importin-b-like 99 243
No external refs found!