1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g11362

Cba_g11362


Description : not classified & original description: none


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g11362

Target Alias Description ECC score Gene Family Method Actions
Adi_g003283 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g028217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10420 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14921 ORF111A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g31599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43490 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44781 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44912 ORF240B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46508 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g46830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47832 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48770 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17074 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09063 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29815 ORF240B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29831 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35305 CRK8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g39239 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g52651 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69578 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03241.t1 Aspi01Gene03241 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12730.t1 ORF240B, Aspi01Gene12730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18112.t1 CRK8, Aspi01Gene18112 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28111.t1 ORF240B, Aspi01Gene28111 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39418.t1 CRK8, Aspi01Gene39418 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40682.t1 CRK8, Aspi01Gene40682 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42316.t1 Aspi01Gene42316 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42447.t1 Aspi01Gene42447 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45967.t1 CRK8, Aspi01Gene45967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53788.t1 ORF240B, Aspi01Gene53788 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59015.t1 ORF240B, Aspi01Gene59015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68194.t1 CRK8, Aspi01Gene68194 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10709 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12367 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16484 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26244 ORF240B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31515 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g31986 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35383 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58565 CRK8 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g67456 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g71010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72659 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76497 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03378 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22263 CRK8 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g27764 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38991 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12603 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20023 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41925 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24454 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29946 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10167 ORF145A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22349 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g38414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10965 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17699 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25605 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25882 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38537 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03565 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g16155 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30657 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04424 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16297 ORF240B not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40745 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65334 CRK8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13875 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c14_23500V3.1 CRK8, Pp3c14_23500 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c3_16120V3.1 Pp3c3_16120 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c6_800V3.1 Pp3c6_800 DNA/RNA polymerases superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c6_9670V3.1 Pp3c6_9670 DNA/RNA polymerases superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g52669 ORF240B not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g58717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g037545.1.1 Solyc02g037545 Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Solyc09g015223.1.1 Solyc09g015223 Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Spa_g28374 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32976 CRK8 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013103 RVT_2 38 116
No external refs found!