Cba_g09567

Description : RING-H2-class ATL-subclass E3 ubiquitin ligase & original description: none

Gene families : OG0002999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002999_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g09567

Target	Alias	Description	ECC score	Gene Family Method
AT5G05810	ATL43	RING/U-box superfamily protein	0.03	OrthoFinder output from all 47 species
Aspi01Gene00440.t1	ATL43, Aspi01Gene00440	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015336001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
Pir_g49281	ATL43	RING-H2-class ATL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	150	193

External Links

No external refs found!