1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g08935

Cba_g08935


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08935

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G06970 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Als_g26891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G019900.1 Ceric.23G019900 not classified & original description: pacid=50610174... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.12 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g23720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00501 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_26520 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g082770.4.1 Solyc04g082770 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g56884 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 71
No external refs found!