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  5. Cba_g08607

Cba_g08607


Description : not classified & original description: none


Gene families : OG0001703 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001703_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08607

Target Alias Description ECC score Gene Family Method Actions
Adi_g103437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04191 AtRH36, SWA3, RH36 SSU processome assembly factor *(SWA3) & original... 0.03 OrthoFinder output from all 47 species
Len_g13474 AtRH36, SWA3, RH36 SSU processome assembly factor *(SWA3) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g02957 AtRH36, SWA3, RH36 SSU processome assembly factor *(SWA3) & original... 0.02 OrthoFinder output from all 47 species
Pir_g12093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g005520.3.1 AtRH36, SWA3,... SSU processome assembly factor (SWA3) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 36 203
IPR001650 Helicase_C 243 346
No external refs found!