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  5. Cba_g08492

Cba_g08492 (AtLa1, La1)


Aliases : AtLa1, La1

Description : nascent RNA chaperone *(LA) & original description: none


Gene families : OG0003172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08492

Target Alias Description ECC score Gene Family Method Actions
Aev_g11405 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21508 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G010200.1 AtLa1, La1,... nascent RNA chaperone *(LA) & original description:... 0.04 OrthoFinder output from all 47 species
Lfl_g25839 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_78251g0010 AtLa1, La1 La protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g43153 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00573 AtLa1, La1 nascent RNA chaperone *(LA) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006630 La_HTH 13 83
IPR014886 La_xRRM 290 383
IPR000504 RRM_dom 122 174
No external refs found!