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  5. Cba_g08477

Cba_g08477


Description : subunit delta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08477

Target Alias Description ECC score Gene Family Method Actions
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.02 OrthoFinder output from all 47 species
Ala_g13555 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Als_g32030 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008406 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.20 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dcu_g11196 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01012108001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24601.1 LOC_Os05g24601 subunit delta of cargo adaptor F-subcomplex 0.04 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Msp_g12080 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Spa_g05208 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 281 500
No external refs found!