Cba_g08136 (FKP1, EMB2778, MVA1, HMGS)


Aliases : FKP1, EMB2778, MVA1, HMGS

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0002570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g08136
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Adi_g056848 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g43170.1 FKP1, EMB2778,... 3-hydroxy-3-methylglutaryl-CoA synthase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000662 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: CDS=211-1596 0.04 OrthoFinder output from all 47 species
Smo179152 FKP1, EMB2778, MVA1, HMGS Secondary metabolism.terpenoids.mevalonate... 0.03 OrthoFinder output from all 47 species
Solyc08g007790.3.1 FKP1, EMB2778,... 3-hydroxy-3-methylglutaryl-CoA synthase 0.04 OrthoFinder output from all 47 species
Spa_g14666 FKP1, EMB2778, MVA1, HMGS EC_2.3 acyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEA Interproscan
BP GO:0006084 acetyl-CoA metabolic process IEA Interproscan
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
InterPro domains Description Start Stop
IPR013746 HMG_CoA_synt_C_dom 224 498
IPR013528 HMG_CoA_synth_N 50 223
No external refs found!