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  5. Cba_g07530

Cba_g07530 (ATMAMI, MAMI)


Aliases : ATMAMI, MAMI

Description : contact site modulator (VST) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000767 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000767_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07530

Target Alias Description ECC score Gene Family Method Actions
Aop_g21356 ATMAMI, MAMI contact site modulator (VST) of... 0.04 OrthoFinder output from all 47 species
Aop_g30498 ATMAMI, MAMI contact site modulator (VST) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene57368.t1 ATMAMI, MAMI,... contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Cba_g10742 ATMAMI, MAMI contact site modulator (VST) of... 0.05 OrthoFinder output from all 47 species
Dcu_g17608 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Dcu_g40059 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
GSVIVT01030002001 ATMAMI, MAMI Vesicle-associated protein 4-2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Msp_g44243 ATMAMI, MAMI contact site modulator (VST) of... 0.04 OrthoFinder output from all 47 species
Nbi_g04032 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Nbi_g05197 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Pir_g15807 ATMAMI, MAMI contact site modulator (VST) of... 0.02 OrthoFinder output from all 47 species
Ppi_g04300 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Ppi_g08349 ATMAMI, MAMI contact site modulator (VST) of... 0.03 OrthoFinder output from all 47 species
Sam_g36210 No alias contact site modulator (VST) of... 0.04 OrthoFinder output from all 47 species
Solyc07g054740.3.1 ATMAMI, MAMI,... Vesicle-associated protein 4-2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000535 MSP_dom 54 158
No external refs found!