Cba_g07410

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g07410

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00266060	SAMDC,...	Polyamine...	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00109640	SAMDC,...	Polyamine...	0.02	OrthoFinder output from all 47 species
AMTR_s00025p00139140	SAMDC4, BUD2,...	Polyamine...	0.03	OrthoFinder output from all 47 species
AT3G25570	No alias	Adenosylmethionine decarboxylase family protein	0.04	OrthoFinder output from all 47 species
AT5G15950	No alias	Adenosylmethionine decarboxylase family protein	0.03	OrthoFinder output from all 47 species
AT5G18930	SAMDC4, BUD2	Adenosylmethionine decarboxylase family protein	0.04	OrthoFinder output from all 47 species
Als_g04281	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.05	OrthoFinder output from all 47 species
Als_g10247	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0090.g042654	SAMDC	EC_4.1 carbon-carbon lyase & original description: CDS=700-2217	0.05	OrthoFinder output from all 47 species
LOC_Os04g04980.1	LOC_Os04g04980	ornithine decarboxylase	0.05	OrthoFinder output from all 47 species
Mp1g22070.1	No alias	ornithine decarboxylase. S-adenosyl methionine decarboxylase	0.03	OrthoFinder output from all 47 species
Mp7g18100.1	No alias	S-adenosyl methionine decarboxylase	0.04	OrthoFinder output from all 47 species
Nbi_g07578	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g32373	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g13674	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g18524	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g098310.1.1	Solyc03g098310	ornithine decarboxylase	0.02	OrthoFinder output from all 47 species
Zm00001e022950_P001	Zm00001e022950	S-adenosyl methionine decarboxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	Interproscan
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	biogenic amine biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	5	260

External Links

No external refs found!

Cba_g07410

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation