Cba_g07398

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g07398

Target	Alias	Description	ECC score	Gene Family Method
AT5G01520	No alias	RING/U-box superfamily protein	0.03	OrthoFinder output from all 47 species
Ceric.19G061700.1	Ceric.19G061700	E3 ubiquitin ligase & original description:...	0.06	OrthoFinder output from all 47 species
Dcu_g03725	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os04g58320.2	LOC_Os04g58320	RING-HC-class E3 ligase	0.03	OrthoFinder output from all 47 species
Mp6g12970.1	No alias	RING-HC-class E3 ligase	0.03	OrthoFinder output from all 47 species
Spa_g05319	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004460_P001	Zm00001e004460	RING-HC-class E3 ligase	0.02	OrthoFinder output from all 47 species
Zm00001e041948_P002	Zm00001e041948	RING-HC-class E3 ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!