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  5. Cba_g07305

Cba_g07305 (ATRABE1D, ATRAB8C,...)


Aliases : ATRABE1D, ATRAB8C, RAB-E1D, ATRAB-E1D, RAB8C

Description : E-class RAB GTPase & original description: none


Gene families : OG0000945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000945_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07305
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Als_g38493 ATRABE1C,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03105 ATRABE1D,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0125.g048540 ATRABE1C,... E-class RAB GTPase & original description: CDS=167-790 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000983.30 ATRABE1C,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
Cre15.g641800 ATRABE1D,... GTP-binding protein yptV2 OS=Volvox carteri 0.01 OrthoFinder output from all 47 species
GSVIVT01025028001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
GSVIVT01033680001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Gb_38643 ATRABE1C,... E-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os03g60530.1 ATRABE1C,... E-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os07g09680.1 ATRABE1E,... E-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os07g13530.1 LOC_Os07g13530 E-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Len_g16013 ATRABE1D,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05441 ATRABE1D,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08232 ATRABE1D,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25496 ATRABE1D,... E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17937 ATRABE1D,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010582 ATRABE1C,... not classified & original description: CDS=1-537 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011564 ATRABE1C,... not classified & original description: CDS=148-741 0.03 OrthoFinder output from all 47 species
Sam_g39848 No alias E-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g011360.3.1 ATRABE1C,... E-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Spa_g10252 ATRABE1C,... E-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011404_P001 ATRABE1C,... E-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000145 exocyst IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP HCCA
MF GO:0061657 UFM1 conjugating enzyme activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0071568 UFM1 transferase activity IEP HCCA
BP GO:0071569 protein ufmylation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 175
No external refs found!