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  5. Cba_g07160

Cba_g07160


Description : not classified & original description: none


Gene families : OG0000185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g07160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00144130 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT2G03110 No alias RNA binding;nucleic acid binding 0.02 OrthoFinder output from all 47 species
Adi_g011502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g016415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g059303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074054 HEN4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g075813 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g128615 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02047 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09715 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g08517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09611 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.05 OrthoFinder output from all 47 species
Als_g16566 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Als_g19267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g33155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61202 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.04 OrthoFinder output from all 47 species
Aob_g06699 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.05 OrthoFinder output from all 47 species
Aop_g04253 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.02 OrthoFinder output from all 47 species
Aop_g19887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene53189.t1 Aspi01Gene53189 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015632 No alias not classified & original description: CDS=147-1991 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062273 No alias not classified & original description: CDS=315-2570 0.03 OrthoFinder output from all 47 species
Cba_g12254 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ceric.14G007100.1 Ceric.14G007100 not classified & original description: pacid=50632910... 0.03 OrthoFinder output from all 47 species
Ceric.25G027100.1 Ceric.25G027100 not classified & original description: pacid=50594480... 0.02 OrthoFinder output from all 47 species
Ceric.26G008900.1 Ceric.26G008900 not classified & original description: pacid=50599495... 0.03 OrthoFinder output from all 47 species
Ceric.32G061200.1 Ceric.32G061200 not classified & original description: pacid=50597564... 0.04 OrthoFinder output from all 47 species
Dac_g02274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g09896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_31686 No alias RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os01g13470.1 LOC_Os01g13470 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
LOC_Os06g23460.1 LOC_Os06g23460 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
LOC_Os09g32300.1 LOC_Os09g32300 KH domain-containing protein HEN4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02093 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Lfl_g03080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_6622g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g10485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03833 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34735 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g14000 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Ppi_g12960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16334 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015180 No alias E3 ubiquitin ligase *(STUBL1/3) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g12504 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g106020.3.1 HEN4, Solyc01g106020 RNA-binding KH domain-containing protein RCF3... 0.03 OrthoFinder output from all 47 species
Solyc03g034200.3.1 Solyc03g034200 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc03g082980.3.1 Solyc03g082980 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Solyc04g077060.3.1 Solyc04g077060 RNA-binding KH domain-containing protein RCF3... 0.02 OrthoFinder output from all 47 species
Spa_g08106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17412 No alias regulatory protein *(RCF3) of HYL1-phosphorylation &... 0.03 OrthoFinder output from all 47 species
Spa_g30529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36753 PEP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039986_P003 Zm00001e039986 KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 100 152
No external refs found!