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  5. Cba_g06984

Cba_g06984


Description : microtubule-stabilizing factor *(WDL) & original description: none


Gene families : OG0000418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06984
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g059112 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Aev_g09008 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Als_g22652 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g26311 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g31410 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g13010 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01370 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01035857001 No alias Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58480.1 LOC_Os03g58480 microtubule-stabilizing factor (WDL) 0.03 OrthoFinder output from all 47 species
Len_g31668 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Mp7g06100.1 No alias microtubule-stabilizing factor (WDL) 0.01 OrthoFinder output from all 47 species
Sam_g18949 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g066030.4.1 Solyc06g066030 microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species
Spa_g21201 No alias microtubule-stabilizing factor *(WDL) & original... 0.06 OrthoFinder output from all 47 species
Spa_g30848 No alias microtubule-stabilizing factor *(WDL) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027329 TPX2_C 108 179
No external refs found!