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  5. Cba_g06579

Cba_g06579


Description : not classified & original description: none


Gene families : OG0006888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06579
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00245550 evm_27.TU.AmTr_v1... Regulator of nonsense transcripts 1 homolog... 0.06 OrthoFinder output from all 47 species
AT5G35970 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 OrthoFinder output from all 47 species
Adi_g009690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05515 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g13293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09081 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19085 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Azfi_s0225.g058913 No alias not classified & original description: CDS=1-1656 0.03 OrthoFinder output from all 47 species
Ceric.19G036700.1 Ceric.19G036700 not classified & original description: pacid=50576348... 0.08 OrthoFinder output from all 47 species
Dcu_g01970 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g37707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15105 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Gb_07655 No alias Regulator of nonsense transcripts 1 homolog... 0.04 OrthoFinder output from all 47 species
LOC_Os09g04440.1 LOC_Os09g04440 Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Lfl_g36332 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10434072g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435849g0020 No alias Regulator of nonsense transcripts 1 homolog... 0.03 OrthoFinder output from all 47 species
Mp3g22970.1 No alias Regulator of nonsense transcripts 1 homolog... 0.02 OrthoFinder output from all 47 species
Msp_g02098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08978 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g16466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36707 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo90782 No alias Regulator of nonsense transcripts 1 homolog... 0.06 OrthoFinder output from all 47 species
Solyc03g097370.4.1 Solyc03g097370 Regulator of nonsense transcripts 1 homolog... 0.06 OrthoFinder output from all 47 species
Tin_g09516 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 773 976
IPR041677 DNA2/NAM7_AAA_11 547 763
No external refs found!