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  5. Cba_g06394

Cba_g06394 (FMA)


Aliases : FMA

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06394
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272070 FMA,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00015p00239460 SPCH,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00081740 MUTE,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT2G46810 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g25773 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03090 FMA bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07138 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04490 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene18861.t1 FMA, Aspi01Gene18861 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene38670.t1 FMA, Aspi01Gene38670 bHLH-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene53774.t1 SPCH, Aspi01Gene53774 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60129.t1 FMA, Aspi01Gene60129 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0042.g026820 FMA bHLH-type transcription factor & original description: CDS=1-477 0.03 OrthoFinder output from all 47 species
Azfi_s0129.g048899 MUTE bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Cba_g00995 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G023000.1 FMA, Ceric.17G023000 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G040300.1 Ceric.21G040300 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g12824 FMA bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18918 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021074001 FMA RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01027446001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_01096 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g52190.1 LOC_Os02g52190 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g50090.1 LOC_Os04g50090 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os09g29360.1 LOC_Os09g29360 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Lfl_g35034 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37122 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_57244g0010 FMA transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_686524g0010 FMA transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Msp_g31314 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10985 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11060 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18808 FMA bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63342 FMA not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g63346 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012172 FMA bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013314 FMA bHLH-type transcription factor & original description: CDS=1-1482 0.03 OrthoFinder output from all 47 species
Sam_g07999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g098720.3.1 Solyc01g098720 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc03g007410.4.1 SPCH, Solyc03g007410 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc11g010340.2.1 Solyc11g010340 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g17260 FMA bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07072 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000161_P002 Zm00001e000161 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e003394_P001 Zm00001e003394 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e009989_P001 Zm00001e009989 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e015494_P002 Zm00001e015494 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e015903_P001 Zm00001e015903 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e023271_P001 Zm00001e023271 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e023838_P003 Zm00001e023838 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e041403_P001 Zm00001e041403 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 263 313
No external refs found!