Cba_g06272


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g06272

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00119280 evm_27.TU.AmTr_v1... Protein FLX-like 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g042500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057286 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g45083 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011503 No alias not classified & original description: CDS=195-1040 0.03 OrthoFinder output from all 47 species
Solyc03g121500.3.1 Solyc03g121500 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g006260.3.1 Solyc07g006260 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g062110.3.1 Solyc07g062110 Protein FLX-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g08661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024097_P001 Zm00001e024097 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041078_P007 Zm00001e041078 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!