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  5. Cba_g05886

Cba_g05886


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0001890 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05886
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT5G01380 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g09969 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15411 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g10408 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47784 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g15267 No alias Trihelix-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene40808.t1 Aspi01Gene40808 Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68301 No alias Trihelix-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g19503 No alias Trihelix-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Gb_20046 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Gb_22614 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47370.1 LOC_Os02g47370 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
LOC_Os05g03740.1 LOC_Os05g03740 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
MA_10436704g0010 No alias transcription factor (Trihelix) 0.05 OrthoFinder output from all 47 species
Mp3g20870.1 No alias transcription factor (Trihelix) 0.01 OrthoFinder output from all 47 species
Msp_g31197 LUG, RON2 component *(LUG/LUH) of transcriptional co-repressor... 0.06 OrthoFinder output from all 47 species
Ore_g11122 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23128 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30407 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44485 No alias Trihelix-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g45245 No alias Trihelix-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g06424 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g005560.4.1 Solyc09g005560 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Spa_g51759 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51760 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029469_P001 Zm00001e029469 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 45 126
No external refs found!