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  5. Cba_g05770

Cba_g05770 (KNAT4)


Aliases : KNAT4

Description : KNOX-type transcription factor & original description: none


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05770
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00026p00162850 KNAT3,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT4G08150 BP, BP1, KNAT1 KNOTTED-like from Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G32040 KNAT5 KNOTTED1-like homeobox gene 5 0.03 OrthoFinder output from all 47 species
AT5G25220 KNAT3 KNOTTED1-like homeobox gene 3 0.03 OrthoFinder output from all 47 species
Adi_g079521 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085792 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08128 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10216 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019880001 KNAT7, IXR11 RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
MA_10428500g0010 KNAT3 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Msp_g30454 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07188 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004352 KNAT4 KNOX-type transcription factor & original description: CDS=1-1356 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.03 OrthoFinder output from all 47 species
Sam_g40671 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29512 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017489_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 374 413
IPR005539 ELK_dom 334 355
IPR005541 KNOX2 231 278
IPR005540 KNOX1 170 209
No external refs found!