Description : plastidial UMP kinase *(PUMPKIN) & original description: none
Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cba_g05741 | |
Cluster | HCCA: Cluster_288 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g42828 | No alias | plastidial UMP kinase *(PUMPKIN) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g27442 | No alias | plastidial UMP kinase *(PUMPKIN) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0018.g007442 | No alias | Trihelix-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0106.g020257 | No alias | plastidial UMP kinase *(PUMPKIN) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g07225 | No alias | plastidial UMP kinase *(PUMPKIN) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Tin_g32248 | No alias | plastidial UMP kinase *(PUMPKIN) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e018537_P001 | Zm00001e018537 | plastidial UMP kinase (PUMPKIN) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
MF | GO:0070006 | metalloaminopeptidase activity | IEP | HCCA |
MF | GO:0071949 | FAD binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001048 | Asp/Glu/Uridylate_kinase | 103 | 312 |
No external refs found! |