1. Home
  2. Species
  3. Cibotium barometz
  4. Sequence
  5. Cba_g05741

Cba_g05741


Description : plastidial UMP kinase *(PUMPKIN) & original description: none


Gene families : OG0002976 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002976_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05741
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Aob_g42828 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27442 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007442 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020257 No alias plastidial UMP kinase *(PUMPKIN) & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g07225 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32248 No alias plastidial UMP kinase *(PUMPKIN) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018537_P001 Zm00001e018537 plastidial UMP kinase (PUMPKIN) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001048 Asp/Glu/Uridylate_kinase 103 312
No external refs found!