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  5. Cba_g05507

Cba_g05507


Description : not classified & original description: none


Gene families : OG0007985 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007985_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05507

Target Alias Description ECC score Gene Family Method Actions
Als_g06680 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G056200.1 Ceric.03G056200 not classified & original description: pacid=50572206... 0.04 OrthoFinder output from all 47 species
Dac_g14206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09935 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g47898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g04619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 91 113
IPR002885 Pentatricopeptide_repeat 117 163
IPR002885 Pentatricopeptide_repeat 16 61
No external refs found!