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  5. Cba_g05502

Cba_g05502 (HTB4)


Aliases : HTB4

Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05502

Target Alias Description ECC score Gene Family Method Actions
Ceric.18G009800.1 Ceric.18G009800 histone *(H2B) & original description: pacid=50621266... 0.03 OrthoFinder output from all 47 species
Ceric.1Z292700.1 Ceric.1Z292700 histone *(H2B) & original description: pacid=50597225... 0.03 OrthoFinder output from all 47 species
Ceric.1Z302700.1 Ceric.1Z302700 histone *(H2B) & original description: pacid=50628371... 0.03 OrthoFinder output from all 47 species
Gb_07112 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Pnu_g17142 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 12 124
No external refs found!