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  5. Cba_g05279

Cba_g05279 (PRHA)


Aliases : PRHA

Description : PHD-type transcription factor & original description: none


Gene families : OG0002217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05279

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272780 HAT3.1,... RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
AT3G19510 HAT3.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc... 0.02 OrthoFinder output from all 47 species
Ceric.1Z301800.1 PRHA, Ceric.1Z301800 PHD-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ore_g29974 PRHA PHD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 569 621
IPR019787 Znf_PHD-finger 291 346
No external refs found!