Cba_g05210 (KCS4)

Aliases : KCS4

Description : 3-ketoacyl-CoA synthase *(KCS) & original description: none

Gene families : OG0000066 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Cba_g05210

Target	Alias	Description	ECC score	Gene Family Method
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.03	OrthoFinder output from all 47 species
AT2G16280	KCS9	3-ketoacyl-CoA synthase 9	0.04	OrthoFinder output from all 47 species
AT4G34250	KCS16	3-ketoacyl-CoA synthase 16	0.03	OrthoFinder output from all 47 species
Adi_g020998	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g25805	G2, POP1, KCS6,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g32874	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g09510	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g26370	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02098.t2	KCS4, Aspi01Gene02098	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000033	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1605	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009870	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.02	OrthoFinder output from all 47 species
Azfi_s0166.g054413	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: CDS=1-1767	0.03	OrthoFinder output from all 47 species
Ceric.15G044000.1	KCS1, Ceric.15G044000	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.17G025200.1	KCS4, Ceric.17G025200	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.19G023000.1	KCS1, Ceric.19G023000	3-ketoacyl-CoA synthase *(KCS) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g09793	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g20904	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g19704	KCS11	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015472001	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	OrthoFinder output from all 47 species
GSVIVT01035769001	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
Gb_23820	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
LOC_Os05g49290.1	KCS4, LOC_Os05g49290	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
LOC_Os06g39750.1	KCS11, LOC_Os06g39750	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Lfl_g05573	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
MA_105806g0010	KCS11	3-ketoacyl-CoA synthase (KCS)	0.03	OrthoFinder output from all 47 species
MA_11217g0010	KCS9	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Mp1g06080.1	KCS4	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Mp2g20220.1	KCS11	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Pir_g10291	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g16093	KCS4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g22130	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g17118	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g31874	KCS10, FDH	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g32080	KCS9	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.02	OrthoFinder output from all 47 species
Smo437285	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	OrthoFinder output from all 47 species
Smo91671	KCS11	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	OrthoFinder output from all 47 species
Spa_g06425	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g07890	KCS5, CER60	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g02656	KCS4	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13894	KCS1	3-ketoacyl-CoA synthase *(KCS) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e012803_P001	KCS20, Zm00001e012803	3-ketoacyl-CoA synthase (KCS)	0.02	OrthoFinder output from all 47 species
Zm00001e037353_P002	KCS11, Zm00001e037353	3-ketoacyl-CoA synthase (KCS)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0048038	quinone binding	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013747	ACP_syn_III_C	402	482
IPR013601	FAE1_typ3_polyketide_synth	96	385

External Links

No external refs found!

Cba_g05210 (KCS4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation