Description : regulatory factor *(RBP45/47) of mRNA stress granule formation & original description: none
Gene families : OG0000531 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000531_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00062p00161920 | ATRBP45A,... | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00157p00079360 | ATRBP47C',... | Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AT1G47500 | ATRBP47C', RBP47C' | RNA-binding protein 47C' | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10963 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.33G008000.1 | ATRBP47B,... | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g05933 | ATRBP45C | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01025280001 | No alias | Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01037634001 | RBP45B, ATRBP45B | Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037635001 | ATRBP45C | Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g07800.1 | LOC_Os03g07800 | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
Len_g17526 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
Len_g22426 | ATRBP47B, RBP47B | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
MA_10433660g0010 | No alias | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g08309 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g10876 | ATRBP47B, RBP47B | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g09272 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g09196 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g34352 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0128.g021871 | No alias | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.02 | OrthoFinder output from all 47 species | |
Smo80061 | ATRBP47C', RBP47C' | Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g080420.4.1 | ATRBP45C, Solyc02g080420 | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g031720.3.1 | ATRBP45C, Solyc03g031720 | mRNA-binding regulatory factor (RBP45/47) | 0.05 | OrthoFinder output from all 47 species | |
Solyc10g005260.3.1 | RBP45B,... | mRNA-binding regulatory factor (RBP45/47) | 0.05 | OrthoFinder output from all 47 species | |
Tin_g11164 | ATRBP47B, RBP47B | regulatory factor *(RBP45/47) of mRNA stress granule... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000547_P001 | Zm00001e000547 | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e010479_P003 | ATRBP45A,... | mRNA-binding regulatory factor (RBP45/47) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012505_P001 | ATRBP45A,... | mRNA-binding regulatory factor (RBP45/47) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e022780_P001 | ATRBP47C',... | mRNA-binding regulatory factor (RBP45/47) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019211 | phosphatase activator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
MF | GO:0031369 | translation initiation factor binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |