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  5. Cba_g05129

Cba_g05129


Description : clade E phosphatase & original description: none


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05129
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT5G27930 No alias Protein phosphatase 2C family protein 0.02 OrthoFinder output from all 47 species
Adi_g015304 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38604 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40148 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08446 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13223 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13045 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39635 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01209 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37892 No alias clade E phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02570 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009275_P001 Zm00001e009275 clade E phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 144 325
No external refs found!