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  5. Cba_g05124

Cba_g05124


Description : not classified & original description: none


Gene families : OG0001843 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g05124

Target Alias Description ECC score Gene Family Method Actions
Adi_g023304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G060800.1 Ceric.24G060800 not classified & original description: pacid=50629393... 0.03 OrthoFinder output from all 47 species
Dac_g12231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013292 No alias not classified & original description: CDS=107-649 0.03 OrthoFinder output from all 47 species
Sam_g06353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06587 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 178 245
No external refs found!