Lfl_g31145

Description : component *(bL17c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g31145

Target	Alias	Description	ECC score	Gene Family Method
AT3G54210	No alias	Ribosomal protein L17 family protein	0.05	OrthoFinder output from all 47 species
Als_g32904	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aop_g05075	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000889.52	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Cre02.g108850	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dac_g01223	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Dcu_g23921	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ehy_g03225	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01037929001	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Gb_36007	No alias	component psRPL17 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Len_g00984	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Lfl_g00441	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Mp8g05860.1	No alias	component psRPL17 of large ribosomal subunit proteome	0.05	OrthoFinder output from all 47 species
Ore_g31023	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Solyc06g082750.3.1	Solyc06g082750	component psRPL17 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Spa_g04291	No alias	component *(bL17c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000456	Ribosomal_L17	95	191

External Links

No external refs found!

Lfl_g31145

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation