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  5. Cba_g04618

Cba_g04618


Description : subunit delta *(CCT4) of CCT chaperonin folding complex & original description: none


Gene families : OG0005270 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005270_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04618

Target Alias Description ECC score Gene Family Method Actions
Als_g13529 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Aop_g04361 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.25 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Dcu_g03883 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
GSVIVT01008363001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
Mp6g14150.1 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.01 OrthoFinder output from all 47 species
Ore_g16303 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Pnu_g13623 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Sam_g12483 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Solyc03g118910.1.1 Solyc03g118910 CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
Spa_g12742 No alias subunit delta *(CCT4) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Zm00001e000128_P002 Zm00001e000128 CCT4 subunit delta of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 35 529
No external refs found!