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  5. Cba_g04085

Cba_g04085 (EMB1135)


Aliases : EMB1135

Description : not classified & original description: none


Gene families : OG0002623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g04085

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00121600 EMB1135,... Protein FORGETTER 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g021474 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16049 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08125 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g10929 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre01.g053250 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre02.g095045 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g13353 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13213 EMB1135 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_10955 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g52020.1 EMB1135, LOC_Os04g52020 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g52030.1 EMB1135, LOC_Os04g52030 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10436402g0020 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp1g14790.1 EMB1135 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g05644 EMB1135 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g37175 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e041616_P001 EMB1135, Zm00001e041616 Protein FORGETTER 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 723 1017
IPR039187 SNO_AAA 164 465
No external refs found!