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  5. Cba_g03978

Cba_g03978 (EDR3, ADLP2, DRP1E,...)


Aliases : EDR3, ADLP2, DRP1E, ADL4, ADL1E, DL1E

Description : phragmoplastin *(DRP1) & original description: none


Gene families : OG0001112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03978

Target Alias Description ECC score Gene Family Method Actions
AT3G60190 EDR3, ADLP2,... DYNAMIN-like 1E 0.02 OrthoFinder output from all 47 species
Adi_g104156 AG68, ADL1,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008868 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: CDS=250-1953 0.05 OrthoFinder output from all 47 species
Ceric.30G034200.1 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Gb_32144 EDR3, ADLP2,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
LOC_Os05g48240.1 AG68, ADL1,... DRP1-type clathrin coated vesicle dynamin 0.03 OrthoFinder output from all 47 species
LOC_Os09g39960.1 EDR3, ADLP2,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
Ppi_g33104 EDR3, ADLP2,... phragmoplastin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40246 No alias phragmoplastin *(DRP1) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g050600.3.1 AG68, ADL1,... DRP1-type clathrin coated vesicle dynamin 0.03 OrthoFinder output from all 47 species
Tin_g31868 EDR3, ADLP2,... phragmoplasTin *(DRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005459_P001 DRP1C, ADL1C,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
Zm00001e009452_P001 DRP1C, ADL1C,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species
Zm00001e026477_P001 AG68, ADL1,... DRP1-type clathrin coated vesicle dynamin 0.03 OrthoFinder output from all 47 species
Zm00001e032371_P002 AG68, ADL1,... DRP1-type clathrin coated vesicle dynamin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009229 thiamine diphosphate biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018199 peptidyl-glutamine modification IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030975 thiamine binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042357 thiamine diphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
MF GO:0043178 alcohol binding IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003130 GED 513 605
IPR045063 Dynamin_N 37 211
IPR000375 Dynamin_stalk 220 487
No external refs found!