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  5. Cba_g03955

Cba_g03955 (SMU2)


Aliases : SMU2

Description : component *(SMU2) of SMU splicing factor complex & original description: none


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03955
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
Gb_08082 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
Smo122486 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Solyc07g017490.3.1 SMU2, Solyc07g017490 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 533 635
IPR012916 RED_N 89 307
No external refs found!