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  5. Cba_g03936

Cba_g03936


Description : not classified & original description: none


Gene families : OG0000907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cba_g03936

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00223610 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.cargo... 0.02 OrthoFinder output from all 47 species
AT4G00355 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Ala_g10611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g04370.1 No alias ATI1/2 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species
Msp_g05359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g26671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA

No InterPro domains available for this sequence

No external refs found!